International collaborations
Ikuro Abe, The University of Tokyo, Japan
Catalytical and structural aspects of enzymes involved in the biosynthesis of lincosamides
Pieter C. Dorrestein, University of California, USA
Development of computational tool for mass spectrometry metabolomics
Ghader Bashiri, University of Auckland, New Zealand
Enzymology of F420-dependent oxidoreductases
Amit Jaisi, Walailak University, Thaiand
Bioprospecting actinomycetes from marine and mangrove environments in Thailand
Axel Innis, Institut Européen de Chimie et Biologie, France
Mode of action of lincosamide antibiotics
Veronika K Pettersen, University Tromso, Norway
LC-MS quantitation of short chain fatty acids
National collaborations
Marcela Krůtová, Motol Hospital, 2nd Faculty of Medicine, Charles University, Prague
Antibiotic resistance in C. difficile
Tomáš Puskal, Institute of Organic Chemistry and Biochemistry, Czech Acad Sci, Prague
Antimicrobial properties of plant-derived metabolites, untargeted metabolomics of bioactive compounds
Robert Vácha, CEITEC, Brno
Evaluation of antimicrobial peptides
Gabriel Demo, CEITEC, Brno
Signaling in microorganisms mediated by ABCF proteins
Collaboration with private sector
Kryštof Šigut, Santiago Lab
Preparation of lincosamides overcoming clinically important resistance mechanisms
SW HOME
Company SEQme has adopted the outputs of the project AZV reg. no. NV17-30753A, solved in the Laboratory of Antibiotic Resistance and Microbial Metabolomics in cooperation with the General University Hospital in Prague, and introduces the “Comprehensive Oral Microbiome Examination“.
The offered commercial product is based on the work published by Najmanova et al., 2021, https://doi.org/10.3389/fcimb.2021.602643 and the HOME (Human oral microbiome evaluation software) software application, applied in RIV.
We have consulted on the current form of the service offered, which is based on the original published work and uses the HOME software database of characterized samples, but reflects technological advances in the field.
Collaborations within IMIC
Martin Schwarzer and Míla Kverka Labs – gut and skin microbiota and associated metabolome
Kamanova Lab – ABCFs in Salmonella enterica; CluSeek testing; metabolites associated with Bordetella infection
Address
Institute of Microbiology, CAS
Vídeňská 1083, 142 20 Prague 4 – Krč
The Czech Republic
Call Us
+420 241 062 371
Email Us
lab111@biomed.cas.cz